NOTES:
In the original structure, Asn46 has a terminal
carboxylic acid group.
The hydrogen atom
is in the wrong position - it is too close to one
of the
hydrogen atoms on the guanine group
of Arg10.
The carboxylic
acid hydrogen is moved in
two steps: A bond is created between it and
the
nitrogen atom it is to be bonded to, and
the bonds it currently makes are
broken.
Then the geometry is optimized using a simple
MM method.
In this example there are pauses of two
seconds. These pauses allow
the steps to
be seen. In normal use, the pauses would
not be used,
and the process would be fast.
Details, read: "Move_a_hydrogen_atom.txt"
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